PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN29172.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 282aa    MW: 31420.9 Da    PI: 7.3401
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN29172.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.79.8e-09756154
                CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                r++ +  rE+ RRdr+N+ f eL  +l ++     +K++Ka+i   +++ +k+L
  KHN29172.1  7 RKTQKADREKLRRDRLNEQFVELGNILDPD----RPKNDKATIIGDTIQLLKDL 56
                6788999********************997....79*************99998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.01E-13576IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.8E-12679IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.544656IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-6756IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.32E-6761No hitNo description
SMARTSM003537.8E-61262IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MDCSAARKTQ KADREKLRRD RLNEQFVELG NILDPDRPKN DKATIIGDTI QLLKDLTSQV  60
SKLKDEYATL NEESRELTQE KNDLREEKAS LKSDIGNLNN QYQQQLRTMF PWTAMDHSVM  120
MAPPSYPYPV PMAVPPGPIP MQPYPFFANQ HPAVISNPCS TYVPYLAPNT IVEQQSTQYV  180
SPPLHPCGRS NVSGKQESKS KSSRESKAEK NEDSNDVTTD LELKTPGSSA DQDLSSRQRK  240
SSKLSRRESS CTEGSSLGRC SSSRSVQDSS SSSVAASRKD NE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0944370.0BT094437.1 Soybean clone JCVI-FLGm-24H6 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003531414.10.0PREDICTED: transcription factor bHLH121-like
RefseqXP_014634451.10.0PREDICTED: transcription factor bHLH121-like
SwissprotQ9LT234e-97BH121_ARATH; Transcription factor bHLH121
TrEMBLA0A0B2RBE10.0A0A0B2RBE1_GLYSO; Transcription factor bHLH121
TrEMBLI1KTH20.0I1KTH2_SOYBN; Uncharacterized protein
STRINGGLYMA08G15740.11e-173(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22823376
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.18e-78bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]